Created
January 20, 2016 16:45
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careful when filtering with many groups in dplyr
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library(dplyr) | |
# create a dummy dataframe with 100,000 groups and 1,000,000 rows | |
# and partition by group_id | |
df <- data.frame(group_id=sample(1:1e5, 1e6, replace=T), | |
val=sample(1:100, 1e6, replace=T)) %>% | |
group_by(group_id) | |
# filter rows with a value of 1 naively | |
system.time(df %>% filter(val == 1)) | |
# user system elapsed | |
# 1.447 0.017 1.476 | |
# ungroup before filtering for a huge speedup | |
system.time(df %>% ungroup() %>% filter(val == 1)) | |
# user system elapsed | |
# 0.007 0.003 0.010 |
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