pyenv does not install module correctly with pyproject.toml

bash

(kdb) [matt@argo] git:pyprojecttoml_build_twine+ </ffast2/kdb>>env PYENV_DEBUG=1 pyenv exec kmerdb -h 2>&1 | tee trace.log
+(/home/matt/.pyenv/bin/pyenv:23): enable -f /home/matt/.pyenv/bin/../libexec/pyenv-realpath.dylib realpath
+(/home/matt/.pyenv/bin/pyenv:30): '[' -z '' ']'
++(/home/matt/.pyenv/bin/pyenv:32): type -P greadlink readlink
++(/home/matt/.pyenv/bin/pyenv:32): head -1
+(/home/matt/.pyenv/bin/pyenv:32): READLINK=/usr/bin/readlink
+(/home/matt/.pyenv/bin/pyenv:33): '[' -n /usr/bin/readlink ']'
+(/home/matt/.pyenv/bin/pyenv:58): '[' -z /home/matt/.pyenv ']'
+(/home/matt/.pyenv/bin/pyenv:61): PYENV_ROOT=/home/matt/.pyenv
+(/home/matt/.pyenv/bin/pyenv:63): export PYENV_ROOT
+(/home/matt/.pyenv/bin/pyenv:65): '[' -z '' ']'
+(/home/matt/.pyenv/bin/pyenv:66): PYENV_DIR=/ffast2/kdb
+(/home/matt/.pyenv/bin/pyenv:69): '[' '!' -d /ffast2/kdb ']'
+(/home/matt/.pyenv/bin/pyenv:69): '[' '!' -e /ffast2/kdb ']'
++(/home/matt/.pyenv/bin/pyenv:73): cd /ffast2/kdb
++(/home/matt/.pyenv/bin/pyenv:73): echo /ffast2/kdb
+(/home/matt/.pyenv/bin/pyenv:73): PYENV_DIR=/ffast2/kdb
+(/home/matt/.pyenv/bin/pyenv:74): export PYENV_DIR
+(/home/matt/.pyenv/bin/pyenv:77): shopt -s nullglob
++(/home/matt/.pyenv/bin/pyenv:79): abs_dirname /home/matt/.pyenv/bin/pyenv
++(/home/matt/.pyenv/bin/pyenv:40): abs_dirname(): local path=/home/matt/.pyenv/bin/pyenv
++(/home/matt/.pyenv/bin/pyenv:44): abs_dirname(): '[' -n /home/matt/.pyenv/bin/pyenv ']'
++(/home/matt/.pyenv/bin/pyenv:45): abs_dirname(): cd_path=/home/matt/.pyenv/bin
++(/home/matt/.pyenv/bin/pyenv:46): abs_dirname(): [[ /home/matt/.pyenv/bin != \/\h\o\m\e\/\m\a\t\t\/\.\p\y\e\n\v\/\b\i\n\/\p\y\e\n\v ]]
++(/home/matt/.pyenv/bin/pyenv:47): abs_dirname(): cd /home/matt/.pyenv/bin
++(/home/matt/.pyenv/bin/pyenv:49): abs_dirname(): name=pyenv
+++(/home/matt/.pyenv/bin/pyenv:50): abs_dirname(): resolve_link pyenv
+++(/home/matt/.pyenv/bin/pyenv:36): resolve_link(): /usr/bin/readlink pyenv
++(/home/matt/.pyenv/bin/pyenv:50): abs_dirname(): path=../libexec/pyenv
++(/home/matt/.pyenv/bin/pyenv:44): abs_dirname(): '[' -n ../libexec/pyenv ']'
++(/home/matt/.pyenv/bin/pyenv:45): abs_dirname(): cd_path=../libexec
++(/home/matt/.pyenv/bin/pyenv:46): abs_dirname(): [[ ../libexec != \.\.\/\l\i\b\e\x\e\c\/\p\y\e\n\v ]]
++(/home/matt/.pyenv/bin/pyenv:47): abs_dirname(): cd ../libexec
++(/home/matt/.pyenv/bin/pyenv:49): abs_dirname(): name=pyenv
+++(/home/matt/.pyenv/bin/pyenv:50): abs_dirname(): resolve_link pyenv
+++(/home/matt/.pyenv/bin/pyenv:36): resolve_link(): /usr/bin/readlink pyenv
+++(/home/matt/.pyenv/bin/pyenv:50): abs_dirname(): true
++(/home/matt/.pyenv/bin/pyenv:50): abs_dirname(): path=
++(/home/matt/.pyenv/bin/pyenv:44): abs_dirname(): '[' -n '' ']'
++(/home/matt/.pyenv/bin/pyenv:53): abs_dirname(): echo /home/matt/.pyenv/libexec
+(/home/matt/.pyenv/bin/pyenv:79): bin_path=/home/matt/.pyenv/libexec
+(/home/matt/.pyenv/bin/pyenv:80): for plugin_bin in "${bin_path%/*}"/plugins/*/bin
+(/home/matt/.pyenv/bin/pyenv:81): PATH=/home/matt/.pyenv/plugins/pyenv-virtualenv/bin:/home/matt/.pyenv/versions/miniconda3-4.7.12/condabin:/home/matt/.rvm/gems/ruby-2.6.5/bin:/home/matt/.rvm/gems/ruby-2.6.5@global/bin:/home/matt/.rvm/rubies/ruby-2.6.5/bin:/home/matt/.rvm/rubies/ruby-2.2.1/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/shims:/home/matt/.pyenv/shims:/home/matt/.pyenv/bin:/usr/local/bin:/usr/bin:/bin:/home/matt/bin:/home/matt/.local/bin:/home/matt/home/bin:/home/matt/.cargo/bin:/opt/texlive/2021/bin/x86_64-linux:/home/matt/.rvm/bin:/home/matt/edirect
+(/home/matt/.pyenv/bin/pyenv:80): for plugin_bin in "${bin_path%/*}"/plugins/*/bin
+(/home/matt/.pyenv/bin/pyenv:81): PATH=/home/matt/.pyenv/plugins/python-build/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/bin:/home/matt/.pyenv/versions/miniconda3-4.7.12/condabin:/home/matt/.rvm/gems/ruby-2.6.5/bin:/home/matt/.rvm/gems/ruby-2.6.5@global/bin:/home/matt/.rvm/rubies/ruby-2.6.5/bin:/home/matt/.rvm/rubies/ruby-2.2.1/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/shims:/home/matt/.pyenv/shims:/home/matt/.pyenv/bin:/usr/local/bin:/usr/bin:/bin:/home/matt/bin:/home/matt/.local/bin:/home/matt/home/bin:/home/matt/.cargo/bin:/opt/texlive/2021/bin/x86_64-linux:/home/matt/.rvm/bin:/home/matt/edirect
+(/home/matt/.pyenv/bin/pyenv:85): '[' /home/matt/.pyenv '!=' /home/matt/.pyenv ']'
+(/home/matt/.pyenv/bin/pyenv:90): export PATH=/home/matt/.pyenv/libexec:/home/matt/.pyenv/plugins/python-build/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/bin:/home/matt/.pyenv/versions/miniconda3-4.7.12/condabin:/home/matt/.rvm/gems/ruby-2.6.5/bin:/home/matt/.rvm/gems/ruby-2.6.5@global/bin:/home/matt/.rvm/rubies/ruby-2.6.5/bin:/home/matt/.rvm/rubies/ruby-2.2.1/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/shims:/home/matt/.pyenv/shims:/home/matt/.pyenv/bin:/usr/local/bin:/usr/bin:/bin:/home/matt/bin:/home/matt/.local/bin:/home/matt/home/bin:/home/matt/.cargo/bin:/opt/texlive/2021/bin/x86_64-linux:/home/matt/.rvm/bin:/home/matt/edirect
+(/home/matt/.pyenv/bin/pyenv:90): PATH=/home/matt/.pyenv/libexec:/home/matt/.pyenv/plugins/python-build/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/bin:/home/matt/.pyenv/versions/miniconda3-4.7.12/condabin:/home/matt/.rvm/gems/ruby-2.6.5/bin:/home/matt/.rvm/gems/ruby-2.6.5@global/bin:/home/matt/.rvm/rubies/ruby-2.6.5/bin:/home/matt/.rvm/rubies/ruby-2.2.1/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/shims:/home/matt/.pyenv/shims:/home/matt/.pyenv/bin:/usr/local/bin:/usr/bin:/bin:/home/matt/bin:/home/matt/.local/bin:/home/matt/home/bin:/home/matt/.cargo/bin:/opt/texlive/2021/bin/x86_64-linux:/home/matt/.rvm/bin:/home/matt/edirect
+(/home/matt/.pyenv/bin/pyenv:92): PYENV_HOOK_PATH=:/home/matt/.pyenv/pyenv.d
+(/home/matt/.pyenv/bin/pyenv:93): '[' /home/matt/.pyenv '!=' /home/matt/.pyenv ']'
+(/home/matt/.pyenv/bin/pyenv:97): PYENV_HOOK_PATH=:/home/matt/.pyenv/pyenv.d:/usr/local/etc/pyenv.d:/etc/pyenv.d:/usr/lib/pyenv/hooks
+(/home/matt/.pyenv/bin/pyenv:98): for plugin_hook in "${PYENV_ROOT}/plugins/"*/etc/pyenv.d
+(/home/matt/.pyenv/bin/pyenv:99): PYENV_HOOK_PATH=:/home/matt/.pyenv/pyenv.d:/usr/local/etc/pyenv.d:/etc/pyenv.d:/usr/lib/pyenv/hooks:/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d
+(/home/matt/.pyenv/bin/pyenv:101): PYENV_HOOK_PATH=/home/matt/.pyenv/pyenv.d:/usr/local/etc/pyenv.d:/etc/pyenv.d:/usr/lib/pyenv/hooks:/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d
+(/home/matt/.pyenv/bin/pyenv:102): export PYENV_HOOK_PATH
+(/home/matt/.pyenv/bin/pyenv:104): shopt -u nullglob
+(/home/matt/.pyenv/bin/pyenv:107): command=exec
+(/home/matt/.pyenv/bin/pyenv:108): case "$command" in
++(/home/matt/.pyenv/bin/pyenv:121): command -v pyenv-exec
+(/home/matt/.pyenv/bin/pyenv:121): command_path=/home/matt/.pyenv/libexec/pyenv-exec
+(/home/matt/.pyenv/bin/pyenv:122): '[' -z /home/matt/.pyenv/libexec/pyenv-exec ']'
+(/home/matt/.pyenv/bin/pyenv:130): shift 1
+(/home/matt/.pyenv/bin/pyenv:131): '[' kmerdb = --help ']'
+(/home/matt/.pyenv/bin/pyenv:138): exec /home/matt/.pyenv/libexec/pyenv-exec kmerdb -h
+(/home/matt/.pyenv/libexec/pyenv-exec:20): '[' kmerdb = --complete ']'
++(/home/matt/.pyenv/libexec/pyenv-exec:24): pyenv-version-name
+(/home/matt/.pyenv/libexec/pyenv-version-name:6): '[' -z kdb ']'
+(/home/matt/.pyenv/libexec/pyenv-version-name:11): OLDIFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-version-name:12): IFS='
'
+(/home/matt/.pyenv/libexec/pyenv-version-name:12): scripts=(`pyenv-hooks version-name`)
++(/home/matt/.pyenv/libexec/pyenv-version-name:12): pyenv-hooks version-name
+(/home/matt/.pyenv/libexec/pyenv-hooks:9): '[' version-name = --complete ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:18): PYENV_COMMAND=version-name
+(/home/matt/.pyenv/libexec/pyenv-hooks:19): '[' -z version-name ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:24): enable -f /home/matt/.pyenv/libexec/pyenv-realpath.dylib realpath
+(/home/matt/.pyenv/libexec/pyenv-hooks:25): '[' -n '' ']'
++(/home/matt/.pyenv/libexec/pyenv-hooks:29): type -P greadlink readlink
++(/home/matt/.pyenv/libexec/pyenv-hooks:29): head -1
+(/home/matt/.pyenv/libexec/pyenv-hooks:29): READLINK=/usr/bin/readlink
+(/home/matt/.pyenv/libexec/pyenv-hooks:30): '[' -z /usr/bin/readlink ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:55): IFS=:
+(/home/matt/.pyenv/libexec/pyenv-hooks:55): hook_paths=($PYENV_HOOK_PATH)
+(/home/matt/.pyenv/libexec/pyenv-hooks:57): shopt -s nullglob
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:63): shopt -u nullglob
+(/home/matt/.pyenv/libexec/pyenv-version-name:13): IFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-version-name:18): '[' -z kdb ']'
+(/home/matt/.pyenv/libexec/pyenv-version-name:18): '[' kdb = system ']'
+(/home/matt/.pyenv/libexec/pyenv-version-name:28): versions=()
+(/home/matt/.pyenv/libexec/pyenv-version-name:29): OLDIFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-version-name:30): IFS=:
+(/home/matt/.pyenv/libexec/pyenv-version-name:31): any_not_installed=0
+(/home/matt/.pyenv/libexec/pyenv-version-name:32): for version in ${PYENV_VERSION}
+(/home/matt/.pyenv/libexec/pyenv-version-name:33): version_exists kdb
+(/home/matt/.pyenv/libexec/pyenv-version-name:24): version_exists(): local version=kdb
+(/home/matt/.pyenv/libexec/pyenv-version-name:25): version_exists(): '[' -d /home/matt/.pyenv/versions/kdb ']'
+(/home/matt/.pyenv/libexec/pyenv-version-name:34): versions=("${versions[@]}" "${version}")
+(/home/matt/.pyenv/libexec/pyenv-version-name:43): IFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-version-name:45): OLDIFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-version-name:46): IFS=:
+(/home/matt/.pyenv/libexec/pyenv-version-name:47): echo kdb
+(/home/matt/.pyenv/libexec/pyenv-version-name:49): IFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-version-name:51): '[' 0 = 1 ']'
+(/home/matt/.pyenv/libexec/pyenv-exec:24): PYENV_VERSION=kdb
+(/home/matt/.pyenv/libexec/pyenv-exec:25): PYENV_COMMAND=kmerdb
+(/home/matt/.pyenv/libexec/pyenv-exec:27): '[' -z kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-exec:32): export PYENV_VERSION
++(/home/matt/.pyenv/libexec/pyenv-exec:33): pyenv-which kmerdb
+(/home/matt/.pyenv/libexec/pyenv-which:17): '[' kmerdb = --complete ']'
+(/home/matt/.pyenv/libexec/pyenv-which:21): '[' '' = --nosystem ']'
+(/home/matt/.pyenv/libexec/pyenv-which:24): system=system
+(/home/matt/.pyenv/libexec/pyenv-which:39): PYENV_COMMAND=kmerdb
+(/home/matt/.pyenv/libexec/pyenv-which:41): '[' -z kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-which:46): OLDIFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-which:47): IFS=:
+(/home/matt/.pyenv/libexec/pyenv-which:47): versions=(${PYENV_VERSION:-$(pyenv-version-name)})
+(/home/matt/.pyenv/libexec/pyenv-which:48): IFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-which:50): for version in "${versions[@]}" "$system"
+(/home/matt/.pyenv/libexec/pyenv-which:51): '[' kdb = system ']'
+(/home/matt/.pyenv/libexec/pyenv-which:55): PYENV_COMMAND_PATH=/home/matt/.pyenv/versions/kdb/bin/kmerdb
+(/home/matt/.pyenv/libexec/pyenv-which:57): '[' -x /home/matt/.pyenv/versions/kdb/bin/kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-which:58): break
+(/home/matt/.pyenv/libexec/pyenv-which:62): OLDIFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-which:63): IFS='
'
+(/home/matt/.pyenv/libexec/pyenv-which:63): scripts=(`pyenv-hooks which`)
++(/home/matt/.pyenv/libexec/pyenv-which:63): pyenv-hooks which
+(/home/matt/.pyenv/libexec/pyenv-hooks:9): '[' which = --complete ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:18): PYENV_COMMAND=which
+(/home/matt/.pyenv/libexec/pyenv-hooks:19): '[' -z which ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:24): enable -f /home/matt/.pyenv/libexec/pyenv-realpath.dylib realpath
+(/home/matt/.pyenv/libexec/pyenv-hooks:25): '[' -n '' ']'
++(/home/matt/.pyenv/libexec/pyenv-hooks:29): type -P greadlink readlink
++(/home/matt/.pyenv/libexec/pyenv-hooks:29): head -1
+(/home/matt/.pyenv/libexec/pyenv-hooks:29): READLINK=/usr/bin/readlink
+(/home/matt/.pyenv/libexec/pyenv-hooks:30): '[' -z /usr/bin/readlink ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:55): IFS=:
+(/home/matt/.pyenv/libexec/pyenv-hooks:55): hook_paths=($PYENV_HOOK_PATH)
+(/home/matt/.pyenv/libexec/pyenv-hooks:57): shopt -s nullglob
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:59): for script in "$path/$PYENV_COMMAND"/*.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:60): realpath /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/conda.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:40): realpath(): local path=/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/conda.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:41): realpath(): local name
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/conda.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:45): realpath(): name=conda.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): '[' conda.bash = /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/conda.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): cd /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): resolve_link conda.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:36): resolve_link(): /usr/bin/readlink conda.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): true
+(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): path=
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n '' ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:50): realpath(): echo /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/conda.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:59): for script in "$path/$PYENV_COMMAND"/*.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:60): realpath /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/python-config.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:40): realpath(): local path=/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/python-config.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:41): realpath(): local name
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/python-config.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:45): realpath(): name=python-config.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): '[' python-config.bash = /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/python-config.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): cd /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): resolve_link python-config.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:36): resolve_link(): /usr/bin/readlink python-config.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): true
+(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): path=
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n '' ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:50): realpath(): echo /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/python-config.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:59): for script in "$path/$PYENV_COMMAND"/*.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:60): realpath /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/system-site-packages.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:40): realpath(): local path=/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/system-site-packages.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:41): realpath(): local name
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/system-site-packages.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:45): realpath(): name=system-site-packages.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): '[' system-site-packages.bash = /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/system-site-packages.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): cd /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): resolve_link system-site-packages.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:36): resolve_link(): /usr/bin/readlink system-site-packages.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): true
+(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): path=
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n '' ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:50): realpath(): echo /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/system-site-packages.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:63): shopt -u nullglob
+(/home/matt/.pyenv/libexec/pyenv-which:64): IFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-which:65): for script in "${scripts[@]}"
+(/home/matt/.pyenv/libexec/pyenv-which:66): source /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/conda.bash
++(/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/conda.bash:4): '[' '!' -x /home/matt/.pyenv/versions/kdb/bin/kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-which:65): for script in "${scripts[@]}"
+(/home/matt/.pyenv/libexec/pyenv-which:66): source /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/python-config.bash
++(/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/python-config.bash:6): '[' '!' -x /home/matt/.pyenv/versions/kdb/bin/kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-which:65): for script in "${scripts[@]}"
+(/home/matt/.pyenv/libexec/pyenv-which:66): source /home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/system-site-packages.bash
++(/home/matt/.pyenv/plugins/pyenv-virtualenv/etc/pyenv.d/which/system-site-packages.bash:6): '[' '!' -x /home/matt/.pyenv/versions/kdb/bin/kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-which:69): '[' -x /home/matt/.pyenv/versions/kdb/bin/kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-which:70): echo /home/matt/.pyenv/versions/kdb/bin/kmerdb
+(/home/matt/.pyenv/libexec/pyenv-exec:33): PYENV_COMMAND_PATH=/home/matt/.pyenv/versions/kdb/bin/kmerdb
+(/home/matt/.pyenv/libexec/pyenv-exec:34): PYENV_BIN_PATH=/home/matt/.pyenv/versions/kdb/bin
+(/home/matt/.pyenv/libexec/pyenv-exec:36): OLDIFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-exec:37): IFS='
'
+(/home/matt/.pyenv/libexec/pyenv-exec:37): scripts=(`pyenv-hooks exec`)
++(/home/matt/.pyenv/libexec/pyenv-exec:37): pyenv-hooks exec
+(/home/matt/.pyenv/libexec/pyenv-hooks:9): '[' exec = --complete ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:18): PYENV_COMMAND=exec
+(/home/matt/.pyenv/libexec/pyenv-hooks:19): '[' -z exec ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:24): enable -f /home/matt/.pyenv/libexec/pyenv-realpath.dylib realpath
+(/home/matt/.pyenv/libexec/pyenv-hooks:25): '[' -n '' ']'
++(/home/matt/.pyenv/libexec/pyenv-hooks:29): type -P greadlink readlink
++(/home/matt/.pyenv/libexec/pyenv-hooks:29): head -1
+(/home/matt/.pyenv/libexec/pyenv-hooks:29): READLINK=/usr/bin/readlink
+(/home/matt/.pyenv/libexec/pyenv-hooks:30): '[' -z /usr/bin/readlink ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:55): IFS=:
+(/home/matt/.pyenv/libexec/pyenv-hooks:55): hook_paths=($PYENV_HOOK_PATH)
+(/home/matt/.pyenv/libexec/pyenv-hooks:57): shopt -s nullglob
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:59): for script in "$path/$PYENV_COMMAND"/*.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:60): realpath /home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:40): realpath(): local path=/home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:41): realpath(): local name
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n /home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:45): realpath(): name=pip-rehash.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): '[' pip-rehash.bash = /home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:46): realpath(): cd /home/matt/.pyenv/pyenv.d/exec
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): resolve_link pip-rehash.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:36): resolve_link(): /usr/bin/readlink pip-rehash.bash
++(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): true
+(/home/matt/.pyenv/libexec/pyenv-hooks:47): realpath(): path=
+(/home/matt/.pyenv/libexec/pyenv-hooks:44): realpath(): '[' -n '' ']'
+(/home/matt/.pyenv/libexec/pyenv-hooks:50): realpath(): echo /home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:58): for path in "${hook_paths[@]}"
+(/home/matt/.pyenv/libexec/pyenv-hooks:63): shopt -u nullglob
+(/home/matt/.pyenv/libexec/pyenv-exec:38): IFS=' 	
'
+(/home/matt/.pyenv/libexec/pyenv-exec:39): for script in "${scripts[@]}"
+(/home/matt/.pyenv/libexec/pyenv-exec:40): source /home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash
++(/home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash:1): PYENV_PIP_REHASH_ROOT=/home/matt/.pyenv/pyenv.d/exec/pip-rehash
++(/home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash:2): PYENV_REHASH_COMMAND=kmerdb
++(/home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash:5): [[ kmerdb =~ ^(pip|easy_install)[23](\.d)?$ ]]
++(/home/matt/.pyenv/pyenv.d/exec/pip-rehash.bash:9): '[' -x /home/matt/.pyenv/pyenv.d/exec/pip-rehash/kmerdb ']'
+(/home/matt/.pyenv/libexec/pyenv-exec:43): shift 1
+(/home/matt/.pyenv/libexec/pyenv-exec:44): '[' /versions/kdb/bin '!=' /home/matt/.pyenv/versions/kdb/bin ']'
+(/home/matt/.pyenv/libexec/pyenv-exec:46): export PATH=/home/matt/.pyenv/versions/kdb/bin:/home/matt/.pyenv/libexec:/home/matt/.pyenv/plugins/python-build/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/bin:/home/matt/.pyenv/versions/miniconda3-4.7.12/condabin:/home/matt/.rvm/gems/ruby-2.6.5/bin:/home/matt/.rvm/gems/ruby-2.6.5@global/bin:/home/matt/.rvm/rubies/ruby-2.6.5/bin:/home/matt/.rvm/rubies/ruby-2.2.1/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/shims:/home/matt/.pyenv/shims:/home/matt/.pyenv/bin:/usr/local/bin:/usr/bin:/bin:/home/matt/bin:/home/matt/.local/bin:/home/matt/home/bin:/home/matt/.cargo/bin:/opt/texlive/2021/bin/x86_64-linux:/home/matt/.rvm/bin:/home/matt/edirect
+(/home/matt/.pyenv/libexec/pyenv-exec:46): PATH=/home/matt/.pyenv/versions/kdb/bin:/home/matt/.pyenv/libexec:/home/matt/.pyenv/plugins/python-build/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/bin:/home/matt/.pyenv/versions/miniconda3-4.7.12/condabin:/home/matt/.rvm/gems/ruby-2.6.5/bin:/home/matt/.rvm/gems/ruby-2.6.5@global/bin:/home/matt/.rvm/rubies/ruby-2.6.5/bin:/home/matt/.rvm/rubies/ruby-2.2.1/bin:/home/matt/.pyenv/plugins/pyenv-virtualenv/shims:/home/matt/.pyenv/shims:/home/matt/.pyenv/bin:/usr/local/bin:/usr/bin:/bin:/home/matt/bin:/home/matt/.local/bin:/home/matt/home/bin:/home/matt/.cargo/bin:/opt/texlive/2021/bin/x86_64-linux:/home/matt/.rvm/bin:/home/matt/edirect
+(/home/matt/.pyenv/libexec/pyenv-exec:48): exec /home/matt/.pyenv/versions/kdb/bin/kmerdb -h
Traceback (most recent call last):
  File "/home/matt/.pyenv/versions/kdb/bin/kmerdb", line 5, in <module>
    from kmerdb import cli
ModuleNotFoundError: No module named 'kmerdb'