Didn't work out of the box so I tweaked it.

ss13.sh

#!/bin/sh
set -e

RED='\033[0;31m'
GREEN='\033[0;32m'
BLUE='\033[0;34m'
NC='\033[0m'

mkdir -p log
echo -e "${GREEN}Checking for wine...${NC}"

if ! [ -x "$(command -v wine)" ]; then
  echo '${RED}Error: wine is not installed.${NC}' >&2
  echo 'Install wine and run this script again.' >&2
  exit 1
fi

if ! [ -x "$(command -v winetricks)" ]; then
  echo '${RED}Error: winetricks is not installed.${NC}' >&2
  echo 'Install winetricks and run this script again.' >&2
  exit 1
fi

function gr {
    if echo '' | grep -P '' 2&>1 >/dev/null; then
	grep -oP $1
    else
	perl -nle "print \$& if m{$1}"
    fi
}

SS13DIR=$PWD/ss13
mkdir -p $SS13DIR
export WINEPREFIX=$SS13DIR
export WINEARCH=win32
export WINEDEBUG=-all

echo -e "${GREEN}Setting up wineprefix...${NC}"
wineboot 2>&1 >log/wine.log
echo -e "${BLUE}Done!${NC}"

echo -e "${GREEN}Setting up windows DLLs...${NC}"
winetricks -q wsh57 mfc42 vcrun2013 2>&1 >log/winetricks.log
echo -e "${BLUE}Done!${NC}"

echo -e "${GREEN}Setting up IE...${NC}"
winetricks -q ie8 2>&1 >>log/wine.log
echo -e "${BLUE}Done!${NC}"

echo -e "${GREEN}Setting up BYOND...${NC}"

DETECTED=0
if [ -f "$SS13DIR/.byondver" ]
then
    DETECTED=$(cat $SS13DIR/.byondver)
fi

MAJOR=$(curl -s http://www.byond.com/download/build/ | gr 'href="\d+/"' | cut -c 7-9 | sort -r | head -n 1)
MAJOR=$(($MAJOR - 1))
MAJORURL=http://www.byond.com/download/build/$MAJOR/
FULLVER=$(curl -s $MAJORURL | gr '\d+\.\d+_byond.zip' | sort -r | head -n 1)
FULLURL=$MAJORURL$FULLVER

if [ ! -d "$SS13DIR/drive_c/Program Files/BYOND" ]
then
    echo -e "${BLUE}Did not detect any BYOND install, installing...${NC}"
    curl -L -O $FULLURL 2>&1 >log/wget.log
    mkdir -p ziptmp
    unzip -qq $FULLVER -d ziptmp
    ls ziptmp
    mv ziptmp/byond $SS13DIR/drive_c/Program\ Files/BYOND
    rm ./$FULLVER
    rm -rf ziptmp
    echo "$FULLVER" > $SS13DIR/.byondver
    echo -e "${BLUE}Done!${NC}"
else
    echo -e "${BLUE}Detected BYOND install with version ${DETECTED}.${NC}"
    if [ "$DETECTED" \< "$FULLVER" -a "$DETECTED" != "$FULLVER" ]
    then
	echo -e "${BLUE}BYOND install is out of date, installing version ${FULLVER}.${NC}"
	rm -rf $SS13DIR/drive_c/Program\ Files/BYOND
	curl -L -O $FULLURL 2>&1 >log/wget.log
	mkdir -p ziptmp
	unzip -qq $FULLVER -d ziptmp
	ls ziptmp
	mv ziptmp/byond $SS13DIR/drive_c/Program\ Files/BYOND
	rm ./$FULLVER
	rm -rf ziptmp
	echo "$FULLVER" > $SS13DIR/.byondver
	echo -e "${BLUE}Done!${NC}"
    else
	echo -e "${BLUE}BYOND install is up-to-date.${NC}"
    fi
fi

echo -e "${GREEN}Setting up DirectX...${NC}"

if [ ! -d "$SS13DIR/drive_c/windows/system32/DirectX" ]
then
    curl -L -O https://download.microsoft.com/download/8/4/A/84A35BF1-DAFE-4AE8-82AF-AD2AE20B6B14/directx_Jun2010_redist.exe 2>&1 >>log/wget.log
    wine directx_Jun2010_redist.exe /c /q /t:C:\\dxtmp 2>&1 >log/dxsdk.log
    pushd $SS13DIR/drive_c/dxtmp
    wine DXSETUP.exe
    popd
    rm -rf $SS13DIR/drive_c/dxtmp
    rm directx_Jun2010_redist.exe
    echo -e "${BLUE}Done!${NC}"
else
    echo -e "${BLUE}Detected existing DirectX install.${NC}"
fi


echo -e "${GREEN}Setting up Gecko...${NC}"

if [ ! -d "$SS13DIR/drive_c/windows/system32/gecko" ]
then
    curl -L -O https://dl.winehq.org/wine/wine-gecko/2.47/wine_gecko-2.47-x86-unstripped.tar.bz2 2>&1 >>log/wget.log
    mkdir -p $SS13DIR/drive_c/windows/system32/gecko/2.47/wine-gecko
    tar -vxjf wine_gecko-2.47-x86-unstripped.tar.bz2 -C $SS13DIR/drive_c/windows/system32/gecko/2.47/wine-gecko 2>&1 >/dev/null
    rm wine_gecko-2.47-x86-unstripped.tar.bz2
    echo -e "${BLUE}Done!${NC}"
else
    echo -e "${BLUE}Detected existing Gecko install.${NC}"
fi

echo -e "${GREEN}Setting up fonts...${NC}"
curl http://pastebin.com/raw/Ziqx5ZrT > ./fontsmooth.reg 2>&1 >>log/wget.log
regedit fontsmooth.reg 2>&1 >log/regedit.log
winetricks -q allfonts 2>&1 >log/fonts.log
winetricks -q settings fontsmooth=rgb 2>&1 >>log/regedit.log
rm fontsmooth.reg
echo -e "${BLUE}Done!${NC}"

cat <<EOF > $SS13DIR/runss13.sh
#!/bin/sh
export WINEPREFIX=$PWD/ss13
export WINEARCH=win32
export WINEDEBUG=-all

wine $WINEPREFIX/drive_c/Program\ Files/BYOND/bin/byond.exe
EOF

chmod a+x $SS13DIR/runss13.sh

if ! [ -f $SS13DIR/icon.png ]
then
    curl -s http://files.byondhome.com/Zamura/2009-10/Zamura-0001/Byond.png > $SS13DIR/icon.png
fi

cat <<EOF > ~/.local/share/applications/byond.desktop
[Desktop Entry]
Type=Application
Version=1.0
Name=BYOND
Comment=A one-way ticket to space hell.
Path=$SS13DIR
Exec=$SS13DIR/runss13.sh
Icon=$SS13DIR/icon.png
Terminal=false
Categories=Games;
EOF

rm -rf ./log