Hermandez
erictleung
/ 1_qiime_part.sh
Created
March 16, 2018 22:46
QIIME2 to Phyloseq Code from https://github.com/joey711/phyloseq/issues/821#issuecomment-371701469
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| # --- | |
| # title: Export QIIME2 OTU table to compatible file for phyloseq | |
| # description: | | |
| # Three main steps to get to compatible file to import to phyloseq | |
| # | |
| # Outline: | |
| # 1. Export OTU table | |
| # 2. Export taxonomy table | |
| # 3. Export phylogenetic tree | |
| # --- |