a.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "%load_ext autoreload\n",
    "%autoreload 2"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [],
   "source": [
    "import higlass\n",
    "import higlass.tilesets\n",
    "from higlass.client import Track, View"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 23,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "yoo\n",
      "expanse\n"
     ]
    },
    {
     "data": {
      "application/vnd.jupyter.widget-view+json": {
       "model_id": "18deec6583ee4aae874476375008a668",
       "version_major": 2,
       "version_minor": 0
      },
      "image/png": "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",
      "text/plain": [
       "HiGlassDisplay(viewconf={'editable': True, 'views': [{'uid': 'ejPGX2G9TumfAqHrAhIdgA', 'tracks': {'top': [], '…"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "view1 = View([\n",
    "    #Track(track_type='top-axis', position='top'),\n",
    "    Track(track_type='heatmap', \n",
    "          position='center',\n",
    "          tileset_uuid='CQMd6V_cRw6iCI_-Unl3PQ',\n",
    "          server=\"http://higlass.io/api/v1/\",\n",
    "          height=250,\n",
    "          options={ 'valueScaleMax': 0.5 }),\n",
    "])\n",
    "\n",
    "display, server, viewconf = higlass.display([view1])\n",
    "display"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
 "metadata": {
  "kernelspec": {
   "display_name": "Python 3",
   "language": "python",
   "name": "python3"
  },
  "language_info": {
   "codemirror_mode": {
    "name": "ipython",
    "version": 3
   },
   "file_extension": ".py",
   "mimetype": "text/x-python",
   "name": "python",
   "nbconvert_exporter": "python",
   "pygments_lexer": "ipython3",
   "version": "3.6.2"
  },
  "widgets": {
   "application/vnd.jupyter.widget-state+json": {
    "state": {
     "0c2c323160f2435cbcc75a76bb1376f3": {
      "model_module": "@jupyter-widgets/base",
      "model_module_version": "1.1.0",
      "model_name": "LayoutModel",
      "state": {}
     },
     "feacf09da9ed4dec9e510690436c38ad": {
      "model_module": "higlass-jupyter",
      "model_module_version": "0.3.0",
      "model_name": "HiGlassDisplayModel",
      "state": {
       "_dom_classes": [],
       "_model_data": [],
       "_view_count": null,
       "auth_token": "",
       "bounded": null,
       "cursor_location": [],
       "dark_mode": false,
       "default_track_options": {},
       "dom_element_id": "ju7fmt",
       "height": 0,
       "layout": "IPY_MODEL_0c2c323160f2435cbcc75a76bb1376f3",
       "location": [
        0,
        99.99999999999999,
        35.968586387434556,
        64.03141361256544
       ],
       "options": {},
       "renderer": "",
       "select_mode": false,
       "selection": [],
       "selection_on_alt": false,
       "viewconf": {
        "editable": true,
        "exportViewUrl": "http://higlass.io/api/v1/viewconfs",
        "locationLocks": {
         "locksByViewUid": {},
         "locksDict": {}
        },
        "trackSourceServers": [
         "http://higlass.io/api/v1"
        ],
        "valueScaleLocks": {
         "locksByViewUid": {},
         "locksDict": {}
        },
        "views": [
         {
          "initialXDomain": [
           0,
           99.99999999999999
          ],
          "initialYDomain": [
           35.968586387434556,
           64.03141361256544
          ],
          "layout": {
           "h": 8,
           "w": 12,
           "x": 0,
           "y": 0
          },
          "tracks": {
           "bottom": [],
           "center": [
            {
             "height": 250,
             "options": {
              "backgroundColor": "#eeeeee",
              "colorRange": [
               "white",
               "rgba(245,166,35,1.0)",
               "rgba(208,2,27,1.0)",
               "black"
              ],
              "colorbarBackgroundColor": "#ffffff",
              "colorbarPosition": "topRight",
              "extent": "full",
              "heatmapValueScaling": "log",
              "labelBottomMargin": 0,
              "labelLeftMargin": 0,
              "labelPosition": "bottomRight",
              "labelRightMargin": 0,
              "labelShowResolution": true,
              "labelTopMargin": 0,
              "maxZoom": null,
              "minHeight": 100,
              "minWidth": 100,
              "mousePositionColor": "#000000",
              "name": "Rao et al. (2014) GM12878 MboI (allreps) 1kb",
              "scaleEndPercent": "1.00000",
              "scaleStartPercent": "0.00000",
              "showMousePosition": false,
              "showTooltip": false,
              "trackBorderColor": "black",
              "trackBorderWidth": 0,
              "valueScaleMax": 0.5
             },
             "server": "http://higlass.io/api/v1/",
             "tilesetUid": "CQMd6V_cRw6iCI_-Unl3PQ",
             "transforms": [
              {
               "name": "ICE",
               "value": "weight"
              }
             ],
             "type": "heatmap",
             "uid": "bi9l8ToWRy-4EcR_1-Xrew"
            }
           ],
           "gallery": [],
           "left": [],
           "right": [],
           "top": [],
           "whole": []
          },
          "uid": "XL_OwbsERXu5LG0DzdiRjg"
         }
        ],
        "zoomLocks": {
         "locksByViewUid": {},
         "locksDict": {}
        }
       }
      }
     }
    },
    "version_major": 2,
    "version_minor": 0
   }
  }
 },
 "nbformat": 4,
 "nbformat_minor": 2
}